FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005006505

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005006505
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences957564
Sequences flagged as poor quality0
Sequence length100-151
%GC49

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[WARN]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
GTTAAGT2850.003420741315.2105931
CTATTCG3100.006171345713.9174846
TATCCAA8450.0078150857.6587347
AATTCCG10750.0087340546.6890235
CCCTGCT14450.00338707126.0000261
CAAAAAG21304.4621236E-55.7664571
Produced by FastQC (version 0.11.5)