FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005006509

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005006509
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences609342
Sequences flagged as poor quality0
Sequence length100-151
%GC48

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[WARN]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
CTTAAAG4806.023084E-412.0961941
CCTTAAT4850.00892501510.4750561
CCAAAAG6000.00387156439.6769551
ACTGAAG4154.3618456E-66.27959435-39
CAAAAAT14450.00321516846.02716971
TTTTCCG14500.0034923285.982717
Produced by FastQC (version 0.11.5)