FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005006514

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005006514
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences1287043
Sequences flagged as poor quality0
Sequence length100-151
%GC43

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[WARN]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
AACTTTG15100.00570387865.72569945
AATTACA15650.0084671385.5244775
CTTTAAT20800.00114778415.2189111
GATTTTG24858.4559826E-55.21879675
TCAATGT18350.0085266785.1042458
CTTCCAC18600.009478785.05804161
Produced by FastQC (version 0.11.5)