FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005006515

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005006515
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences440615
Sequences flagged as poor quality0
Sequence length100-151
%GC45

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[WARN]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
CACACGT1504.6876245E-528.7254187
CACGTCT1751.337839E-424.6217889
ACACGTC2051.3866747E-524.52178
GCACACG2951.0359196E-519.4748616
AGAGCAC2050.00963195717.51553
CCCCTTT3050.005367510514.2111171
CTTCGGA4150.0028895712.1850341
TAGTGCG950.00809805610.61533420-24
GACCAGC4800.00893270110.4728096
ACCCCTG1150.002933328510.0091795-99
Produced by FastQC (version 0.11.5)