FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005006519

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005006519
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences1124082
Sequences flagged as poor quality0
Sequence length100-151
%GC48

[OK]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[WARN]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
CTCGGAT4850.00989007310.3320871
CTTATTT14103.9743204E-46.60018351
TGAAGTT13100.0094144865.9830094
Produced by FastQC (version 0.11.5)