FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005006521

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005006521
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences1475977
Sequences flagged as poor quality0
Sequence length100-151
%GC49

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[WARN]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
GATTCAC6650.0010173549.594175
TACTGTT12550.0021540677.7234974145
CCAAAAG15201.5278018E-46.5435621
AGGTAGA12550.006357536.21454144
GTTTCGG16200.00231919465.70109221
ATTTACC15550.0094925735.46747976
CTTCAAT17950.0077688875.1452761
Produced by FastQC (version 0.11.5)