FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005006523

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005006523
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences1685213
Sequences flagged as poor quality0
Sequence length100-151
%GC46

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[WARN]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
GTCGAGG9553.0819548E-48.2700991
GTCTACA9150.00184438837.84693861
CTCGATC10650.0083284676.72271632
GTTCAAG13550.001768666.35862641
GGATTTA19151.0113572E-56.3524684
TCCGAAA25655.590525E-45.506836145
CAAGAAT22501.1280649E-45.424851
GTAAAAG26404.189746E-55.1673871
AATCCGC18400.0095567655.0547265
CACAAAA24403.7872166E-45.00242331
Produced by FastQC (version 0.11.5)