FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005006527

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005006527
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences571032
Sequences flagged as poor quality0
Sequence length100-151
%GC47

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[WARN]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
CTCCAAC4350.004136169311.6155981
CTCCAAA5059.652932E-411.4348751
CCTCCGT5700.002648436710.1308971
CTTCGAT6000.0040492119.62435151
CCCGGAT6200.00530640189.31388951
ACATTTC7300.00208965838.8641543
CTTCCAT9502.7414018E-48.357991
TGTTTTT17050.00367832375.48196944
GACTGGT3150.0093139945.477377460-64
TTTTTTC20100.0045875985.00695325
Produced by FastQC (version 0.11.5)