FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005006531

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005006531
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences1228637
Sequences flagged as poor quality0
Sequence length100-151
%GC45

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[WARN]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
CCAATCC9402.4455483E-48.4487543
CCCAGAT11150.00148171667.1398811
GATCGAT10600.00716829956.82758861
CTTTAAG12250.00398830656.49874931
GTTTGAA14000.00233400386.20335151
GAAATGT15600.00121798676.0165373
GTTTTAA16550.00239821525.6848441
Produced by FastQC (version 0.11.5)