FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005006547

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005006547
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences1725540
Sequences flagged as poor quality0
Sequence length100-151
%GC43

[OK]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[WARN]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
CTCTAAT6750.00100977499.60220053
CCCTCGT6650.0094653848.6815031
CTTAAAT16808.900248E-66.8728561
CCCAGCT12050.00346156686.5876751
CTTTCGT16202.8501073E-46.23648071
CTCCCAA14200.0028275196.098451
AACCGAA15850.0097915735.45219565
CTAAAAA24406.1839244E-55.32364651
GTCAGAA19600.0032077845.1546421
TCAGAAC19650.00339640125.13109542
Produced by FastQC (version 0.11.5)