FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005006551

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005006551
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences498236
Sequences flagged as poor quality0
Sequence length100-151
%GC46

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[WARN]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
CCCCCAG1900.006071958718.975241
GTTCTGT5300.001458031510.8839121
GTTCAAA5500.001985150410.4881331
CCCGGAA6400.0069468819.013241
CCGAAAT6600.0089397898.7401111
CAAAGAT8650.00101204988.3359441
CAGGGGG1650.00648656777.820773650-54
TAAAATA11150.00163061797.07359272
Produced by FastQC (version 0.11.5)