FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005006555

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005006555
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences1272796
Sequences flagged as poor quality0
Sequence length100-151
%GC49

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[WARN]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
CCCGAAT8950.00124635318.164611
CTTCGAA8100.00513112738.027075
GTAGTCG11850.00286984726.70615968
AAGCACA12650.00568075946.28205446
AGCTCTT12750.00616530656.2327844
CTTCAAG19303.6866567E-45.67926841
CAAAGGA19905.573859E-45.5080341
Produced by FastQC (version 0.11.5)