FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005006558

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005006558
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences519173
Sequences flagged as poor quality0
Sequence length100-151
%GC49

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[WARN]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
GTTCGAT4150.00310488312.0693711
GATCCCG4350.00447512111.4933875
GTTCAGA4500.00568360211.1306431
TAGGCTA950.00862297710.525928570-74
ATTTTCA12200.00437488036.43979646
Produced by FastQC (version 0.11.5)