FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005006567

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005006567
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences2065699
Sequences flagged as poor quality0
Sequence length100-151
%GC45

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[WARN]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
TAGGCGC4850.00930332910.4184485
CTCGAAG9300.0020005987.7825461
CTCATGG14850.0045090925.84870151
CTTGGAT14900.00468071465.8290751
ACTTTAC16250.00199147225.7747976
CTCAAAG21603.2854083E-45.36130951
CAAGAAC23251.6375737E-45.29213141
CCCGAAA19400.00272079325.22313171
CATCGAC21450.00172665945.0613761
CCCATTT21450.00172665945.0613761
Produced by FastQC (version 0.11.5)