FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005006573

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005006573
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences1564408
Sequences flagged as poor quality0
Sequence length100-151
%GC47

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[WARN]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
CTCACAG6950.00133144799.3159661
ATCTGAG7150.0017889729.0189126
GTTCAAT17209.4705974E-56.27383331
CTAAAAT15300.00100749676.11254551
Produced by FastQC (version 0.11.5)