FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005006577

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005006577
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences1020006
Sequences flagged as poor quality0
Sequence length100-151
%GC43

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[WARN]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
GTCTAAG1600.002242352622.537971
CCTCGAT6050.0043717649.5367281
CTCTATT7750.00349793568.3754011
GCAGTTG9700.0032778957.39948464
AAAACCA16000.00176869615.83171944
CTTAAAA15250.0062887075.6751351
CCAAAAT15750.0089759435.49497181
CAACAAA18650.0017305965.41394661
CTTCAAA21250.00159527295.09092951
Produced by FastQC (version 0.11.5)