FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005006580

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005006580
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences2355375
Sequences flagged as poor quality0
Sequence length100-151
%GC48

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[WARN]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
CGAACGC18303.453823E-56.26820041
TCAAGTA17207.098476E-45.80892854
CTAAAAT19901.16527786E-45.7642251
GTTTTAC22752.254515E-55.6723771
GATCAAT15250.0067276285.6413811
GTTTAAT17950.0069923165.1922181
Produced by FastQC (version 0.11.5)