FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005006590

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005006590
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences820804
Sequences flagged as poor quality0
Sequence length100-151
%GC47

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[WARN]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
CTTGAAT8150.0053743117.9851351
GTTGAAA12255.182341E-47.08341261
GGTGAAG13000.00102000956.6747541
TTGAATT12050.00346532676.5860122
CTTTTAT15650.0081262765.5445241
TTTTCCG18150.0074221925.1647047
Produced by FastQC (version 0.11.5)