FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005006594

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005006594
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences909581
Sequences flagged as poor quality0
Sequence length100-151
%GC49

[OK]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[WARN]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
CACGTCT3800.001619374513.1639849
ACACGTC3850.001786821412.9930248
CTCAGCT4150.003011291412.1204011
AGAGCAC5852.900128E-410.9940973
CACGGAC7150.00174125969.0448941
ATAATGC8300.007037697.7488523
Produced by FastQC (version 0.11.5)