FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005006595

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005006595
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences586893
Sequences flagged as poor quality0
Sequence length100-151
%GC47

[OK]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[WARN]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
AGATCTC3250.00801818218.080599145
CAAAGTT6250.0089163638.7433931
AAAGCAT9454.8668217E-47.9240675
CAACAAA9500.0043295257.190291
TCGGTAT5552.9181584E-45.091367120-124
Produced by FastQC (version 0.11.5)