FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005006599

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005006599
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences1208225
Sequences flagged as poor quality0
Sequence length100-151
%GC46

[OK]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[WARN]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
CTCGCAT4750.007806414310.6673051
CTACGAA6607.838478E-49.870721
CTCTCCC8350.00662277137.80200621
CTCCAAA13100.00110079216.6307131
CTTAAAT13650.00175216156.36354161
CTTCCAT20151.21208905E-45.7477151
AATCATT21600.00193857155.01676942
Produced by FastQC (version 0.11.5)