FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005006609

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005006609
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences427502
Sequences flagged as poor quality0
Sequence length100-151
%GC46

[OK]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[WARN]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
TAAGAAT4804.414209E-513.4484153
CTCCCAG3300.00835242813.2927811
CGAAGAT4950.00982526710.3388291
TCAAAAT10206.285642E-47.73594142
CAACAAA8600.00786683157.65107731
Produced by FastQC (version 0.11.5)