FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005006614

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005006614
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences719575
Sequences flagged as poor quality0
Sequence length100-151
%GC43

[OK]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[WARN]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
CTCACAG4550.00529878511.2368451
CTTAATT6500.00710539248.9894751
CCTTATT6700.009108318.7211331
CACAGAT8150.0049088358.0657111
CTTCAAG9400.0020281697.7701581
CTTTATT17702.707111E-77.42774441
ACATTTC10800.00109207397.347166
CTTCTAT11100.00127993267.2381471
CTTATTT12150.00332040256.6126281
CTTTTTT32902.1282176E-106.2161271
CTTCAAA14450.00299689646.0655631
CTTTTAT17650.00459819475.3796791
CTTTCTT20558.6125743E-45.33134941
Produced by FastQC (version 0.11.5)