FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005006617

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005006617
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences1011920
Sequences flagged as poor quality0
Sequence length100-151
%GC46

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[WARN]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
CCCGACT4450.004772224511.396491
CTACGAT8650.0090073647.5380581
CTTCAGA13552.6066586E-57.48551751
GTTTTAA10750.0082810516.72612956
CCATAAA12250.0039427286.5056351
CTTCAGC16800.00282819765.60618161
CTTTTTA19956.4650504E-45.4473021
Produced by FastQC (version 0.11.5)