FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005006622

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005006622
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences420911
Sequences flagged as poor quality0
Sequence length100-151
%GC44

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[WARN]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
CCCACCT1700.003073059321.343551
CTATAAC2556.8952264E-519.9206471
CCCATGA3153.4750853E-416.1262381
CTCCGCT3200.007158488513.6065141
CTTTTTT21100.09.2859611
AAATTTA8200.00566060477.93732364
CTTTATT9200.0017456347.8878341
Produced by FastQC (version 0.11.5)