FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005006627

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005006627
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences1943881
Sequences flagged as poor quality0
Sequence length100-151
%GC46

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[WARN]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
CTAATAC8507.8457684E-59.3811551
CTACCAT12458.382445E-68.1515691
GTCTGAT18202.7098458E-56.37281271
CTCCGCT14450.00326858486.01999241
CTTACAG17406.737168E-45.8325881
CTCCGAT16200.00182500485.8171581
GTTGAAT15150.005532685.74184041
CTCTTGA15500.0071225985.61218641
ATTTGCT23804.1585667E-55.45866066
CTTGAAG22907.338609E-45.06485461
GATTTGC21550.00190525335.02382475
Produced by FastQC (version 0.11.5)