FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005006629

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005006629
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences733368
Sequences flagged as poor quality0
Sequence length100-151
%GC49

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[WARN]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
CTCTGGG3150.006806642713.7124711
AGGTCAG6950.00134695949.3028034
ATATGAA12950.0031412537.4304223145
AAATACC9850.00377208977.2932296
CTCCACC12054.51324E-47.1691751
Produced by FastQC (version 0.11.5)