FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005006640

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005006640
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences589278
Sequences flagged as poor quality0
Sequence length100-151
%GC48

[OK]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[WARN]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
AGAATTC4854.9775408E-513.2792964
CTCAAAA8003.0869305E-610.9592161
ACACAGA5400.0018160110.6015772
TTTGTCG6356.0975796E-410.1424536
ACAAGAT7300.00218111188.8225463
ATTCCAT8600.0095370187.4889058
Produced by FastQC (version 0.11.5)