FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005006649

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005006649
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences926732
Sequences flagged as poor quality0
Sequence length100-151
%GC52

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[WARN]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
GTCCCAT5109.0747555E-512.4562641
GTTTCGT6650.00105747879.5529241
CTTCAAA12951.6654232E-47.08580261
CAAAAAT15853.967422E-56.6800151
CAAAAAG16750.00371549885.4782771
Produced by FastQC (version 0.11.5)