FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005006652

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005006652
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences1619271
Sequences flagged as poor quality0
Sequence length100-151
%GC46

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[WARN]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
CTCTGAC9450.00226493097.68464331
CTTCGCG9700.00292562537.4865861
CCAAGGA16450.00214388155.7389571
CTTCAAG20851.8910767E-45.57274871
CTTTGAC17150.00351514785.50471451
CTCACCG16000.009903675.4464911
Produced by FastQC (version 0.11.5)