FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005006661

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005006661
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences1240654
Sequences flagged as poor quality0
Sequence length100-151
%GC48

[OK]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[WARN]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
CACGTCT6901.3882074E-510.9792579
ACACGTC6951.5038024E-510.9002698
AGAGCAC8006.273249E-610.3308983
CACACGT6701.2443041E-410.2790877
AGCACAC9303.5753128E-69.6269735
GCACACG8801.9465906E-59.3913476
CGCGAAT6150.0069734849.0109811
GAGCACA9404.0659736E-48.05956654
CTTCAAC18454.1291094E-45.63186261
AGATCTC6304.3399057E-55.4446034140-144
Produced by FastQC (version 0.11.5)