FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005006666

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005006666
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences1627068
Sequences flagged as poor quality0
Sequence length100-151
%GC48

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[WARN]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
ACACGTC6404.9103357E-511.2653418
CACGTCT6608.132838E-49.831579
CACACGT6000.004095489.613097
AGCGACC8600.0088596677.55258562
GCACACG10659.4816124E-47.44676076
CTCGAAC10650.00702312176.84233141
TCAATCC16800.00296456935.58451753
CCCTGCT18300.0072383195.17661571
Produced by FastQC (version 0.11.5)