FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005006674

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005006674
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences1379993
Sequences flagged as poor quality0
Sequence length100-151
%GC48

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[WARN]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
GTTTGGT6500.0080155428.8593891
CCACAAT10306.750695E-47.6874561
TCCACCC10250.00560475477.00334847
CTTTGGT11650.0024931316.79663471
CTTTCAT21854.1758086E-45.27103331
Produced by FastQC (version 0.11.5)