FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005006679

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005006679
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences642461
Sequences flagged as poor quality0
Sequence length100-151
%GC47

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[WARN]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
GTCTACG2500.00162096517.009981
CCCAAAT3458.3039125E-414.3804171
TATATCT7400.00275696148.5977815
CCCGAAA8500.00101032058.3382251
ACCCCTC1900.0086255517.5756607135-139
AAATCAG10308.1710686E-47.5497244
CAAAGAT10200.00603825046.94852071
ATTAAAA12600.00663799146.1874921
Produced by FastQC (version 0.11.5)