FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005006689

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005006689
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences633995
Sequences flagged as poor quality0
Sequence length100-151
%GC45

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[WARN]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
CTCGTAC2550.001628733716.997781
GAACCAC3457.3602726E-414.6112645
GATCACC4300.003862179411.7229916
CTCGAAG6003.312934E-410.8360841
GTCCGGA6150.0049326049.3971471
AGAATAC7350.00219218.8178775
CTGGTGG8256.212274E-48.7564331
CAGCGGA7800.00364836898.335451
CTTTGTT10004.7231073E-47.94646171
GGAATAT13852.9649978E-46.75931075
CTTTGAT13000.00103008696.66835981
AAATTTA14354.551187E-46.5258534
Produced by FastQC (version 0.11.5)