FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005006695

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005006695
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences1864647
Sequences flagged as poor quality0
Sequence length100-151
%GC48

[OK]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
CTTCCAT32452.6471207E-75.36690951
CTTTGAC21953.9775445E-45.28948261
CTGCGAT18500.0086323735.0991691
TTCCATT32802.0203188E-65.0649312
CTTCAAT27406.4952954E-55.03188561
Produced by FastQC (version 0.11.5)