FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005006699

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005006699
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences1267924
Sequences flagged as poor quality0
Sequence length100-151
%GC47

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[WARN]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
CAACCCT4400.00495875711.3384059
GGGGGGG1350.00111141599.50288825-29
CTCCAAT10601.111144E-48.0954341
CTCCGGT11800.00305582266.66615631
AATATAA26401.3746794E-65.6698735
CTTTCAA20852.3550897E-45.48755261
CTGCAAG17350.0048304415.3580731
Produced by FastQC (version 0.11.5)