FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005006701

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005006701
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences1229377
Sequences flagged as poor quality0
Sequence length100-151
%GC45

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[WARN]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
GTCTAAT4700.007231029710.7779051
GTACAAT8406.221906E-610.3379921
GTACAAG7853.7229224E-49.2185911
CCCGCTT10901.4279081E-58.63081
GTTGAAT10105.1685487E-47.88143871
GTTTATA13552.1412234E-46.9428581
CTTTACT10650.007508526.7949241
GTATAAT16052.4357367E-46.31229351
GTTTAAT12750.0060574526.24333571
CTCAAAA18853.0546403E-45.75856261
GTATATT17100.00353730055.5015041
Produced by FastQC (version 0.11.5)