FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005006705

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005006705
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences482201
Sequences flagged as poor quality0
Sequence length100-151
%GC46

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[WARN]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
CCTCAAT2950.00416084614.7671141
TTCTAAG3250.00813871913.3455916
CTCTGCT5900.00335640939.8447431
CTCAAAG6050.00413047949.6006581
CCCTTTT6300.00576673639.2196811
CTTTTCC13250.00120571086.57554531
ATTGCGT2550.0061641366.233431385-89
Produced by FastQC (version 0.11.5)