FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005006707

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005006707
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences1076202
Sequences flagged as poor quality0
Sequence length100-151
%GC48

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[WARN]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
CCAAGAT7400.00217341688.8273261
CCCCCCC1550.00340029368.40302135-39
CTTCAAT14808.148579E-56.8656981
CTTTAAT13200.00116349366.59820371
TTACTTT15500.007384695.59326843
CATCGCC20750.00106849095.2467641
Produced by FastQC (version 0.11.5)