FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005006720

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005006720
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences974795
Sequences flagged as poor quality0
Sequence length100-151
%GC45

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
CTCAAAA13051.895527E-68.2863571
AAATCTA8000.0049027968.0674224
CTTTTAT20408.431016E-97.4211631
AACGATT10800.00115324047.3102132
GTTTGAA12150.00381075826.5267841
TAAATCT12350.00477643646.3871623
CTTCCAC14750.00436465165.86505461
CTTTGAA17950.00107223375.622721
CAAAAAG21250.00160386035.08879761
TTTTATT30101.32684345E-55.00741862
Produced by FastQC (version 0.11.5)