FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005006729

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005006729
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences486421
Sequences flagged as poor quality0
Sequence length100-151
%GC50

[OK]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[WARN]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
CACACGT1951.1600958E-525.0936287
CACGTCT2655.1758434E-621.1029999
AGCACAC2859.710469E-619.6220865
GCACACG3654.2174306E-617.2365236
ACACGTC2902.461423E-416.8733028
GAGCACA2952.8043517E-416.5873154
AGAGCAC3851.2798779E-414.525443
AAGAGCA5500.00256419610.1698992
CCCTGCT5950.00474541779.4405431
CGTCTTA1650.0080457449.180417140-144
CAGTCAC2750.0038768146.516907130-134
Produced by FastQC (version 0.11.5)