FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005006730

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005006730
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences662564
Sequences flagged as poor quality0
Sequence length100-151
%GC48

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[WARN]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
CACGTCT2353.9637758E-521.4088179
CACAATT4350.00427261111.5656837
GTTTGGA5150.001128471511.2239471
ATCCGAA7602.7288057E-49.5071261
CTCATTT6350.00640929029.1028861
AATATTG10559.8842225E-58.1756845
Produced by FastQC (version 0.11.5)