FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005006739

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005006739
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences907827
Sequences flagged as poor quality0
Sequence length100-151
%GC47

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
CTCCAAA10005.886124E-69.2562391
CCCCCCC1704.2002377E-49.109302130-134
CGTAAAA9150.00727087778.963991145
CACATCT6550.0093264118.6964071
GTAAGAA7700.0037039168.3222921
CCCGAAA10509.302406E-47.45924041
GTCATCG10250.00606083546.9465211
CAATGAT12759.7531884E-46.70134931
Produced by FastQC (version 0.11.5)