FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005006740

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005006740
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences954555
Sequences flagged as poor quality0
Sequence length100-151
%GC49

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[WARN]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
AACTAGC1204.8322292E-429.320826
GTTCAAA9654.258671E-58.787031
CTTTAAT11400.00240908126.8182991
GCAAATT11650.00312428926.6516912
CTTGAAA15450.0090942965.488341
GAAATAT19150.00324134885.1496663
Produced by FastQC (version 0.11.5)