FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005006742

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005006742
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences1233949
Sequences flagged as poor quality0
Sequence length100-151
%GC49

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[WARN]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
CTCGAAT5501.470447E-411.8289341
GGATGTC11600.00240563536.8196135
CTTCGAT12600.00541638026.3108511
CTTTCAT19708.9230554E-55.8711011
CAACCTG15100.0058129545.71586754
CTTTTAT18450.00146806245.4852631
Produced by FastQC (version 0.11.5)