FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005006750

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005006750
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences2062354
Sequences flagged as poor quality0
Sequence length100-151
%GC43

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[WARN]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
CACTGGT9650.00291991057.48830133
CACACCT10200.00488991067.10277841
CTTGAGT11450.00194191426.9601021
CTTCCAG34450.06.72959851
CTCCCGA10900.0092966666.64663651
CTCCCAG12000.00318134046.6410981
TGCACTT18403.3307348E-56.28366233
TACCCTT16400.006070016.2423673145
CTTGATC15650.00121556116.01807261
CATAAAT33955.711627E-105.9751211
CTTCGGT18752.8020644E-45.7958671
GTTTGAT24057.603274E-65.7235691
CAATACC25854.287467E-65.60528761
CAACGAA17000.00325949565.5401671
CTTAAAA37305.6097633E-95.43848131
CATGAAC18750.00175185015.4094761
ATTCCGT21450.00170448325.0663171
CATCCAT31554.913094E-65.0518651
Produced by FastQC (version 0.11.5)