FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005006751

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005006751
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences1002002
Sequences flagged as poor quality0
Sequence length100-151
%GC48

[OK]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[WARN]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
GATCGTT5750.005832644611.093188145
GTCCGCT7950.00394495168.26451
CTTACCG8500.00719615777.7297381
TCGATCA9600.00282562277.5126163
CTTCAAA16700.00240662865.6828741
CTTTTAT16800.00258356435.64904741
Produced by FastQC (version 0.11.5)