FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005006752

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005006752
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences1475429
Sequences flagged as poor quality0
Sequence length100-151
%GC47

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
CTCTGAA10901.8370483E-69.1221561
GTTCGAT10951.7544632E-47.78328751
CTTTTAA22852.8059636E-55.594771
CAGATAT23153.611639E-55.5069223
Produced by FastQC (version 0.11.5)