FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005006753

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005006753
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences3685462
Sequences flagged as poor quality0
Sequence length100-151
%GC46

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[WARN]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
CTCACAC11352.2068068E-47.6312591
GTTTACT20552.6304577E-55.9710121
CCTCAGA15800.00142610935.9387781
CCACAAT34509.295036E-105.85800551
CATCGAT30252.380344E-65.24938151
CTCTCAT21150.00148698055.11907771
Produced by FastQC (version 0.11.5)